An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0191359db001
Number of genes with the motif: 49
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910111213
A 0% 86% 0% 71% 0% 57% 14% 57% 14% 14% 14% 86% 14% 43%
C 71% 14% 71% 29% 71% 29% 86% 43% 86% 0% 86% 14% 29% 57%
G 0% 0% 14% 0% 14% 14% 0% 0% 0% 0% 0% 0% 0% 0%
T 29% 0% 14% 0% 14% 0% 0% 0% 0% 86% 0% 0% 57% 0%
consensusYACMCMCMCTCAYM

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
AP2A1 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC4V2_0_00568 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC4V2_0_00612 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC4V2_0_00680 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC4V2_0_01385 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC5V2_0_00885 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC5V2_0_01147 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC5V2_0_01148 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC5V2_0_01370 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BC5V2_0_01677 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BEC6V2_0_00817 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
CRTF dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC1V2_0_00312 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC1V2_0_00724 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC1V2_0_01064 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC1V2_0_01897 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC2V2_0_01271 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC2V2_0_03272 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC2V2_0_03346 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC3V2_0_00887 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
JC3V2_0_01653 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
abcG2 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
abcG6 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
abnB dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
aslN dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
dcd3A dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
dstB dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
erkA dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0231588 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0233215 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0233397 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0233528 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0237680 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
geneDDB0237690 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
gpaB dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
gxcU dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
orcA dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
osbA dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
pdhB dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
pks29 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
rcnA dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
rps18 dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
sigG dictyBase Home >> Chromosome 2:3000474..3004892 >> Gene: ap2a1-1 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.