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Detailed motif information

General information
Motif ID: mDDB0215998db025
Number of genes with the motif: 66
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910111213
A100% 80%100% 80% 80%100% 80% 20% 80% 40% 20% 60% 80% 40%
C 0% 20% 0% 0% 20% 0% 20% 40% 20% 40% 40% 40% 20% 60%
G 0% 0% 0% 20% 0% 0% 0% 0% 0% 20% 0% 0% 0% 0%
T 0% 0% 0% 0% 0% 0% 0% 40% 0% 0% 40% 0% 0% 0%
consensusAAAAAAAYAMYMAM

Matching with known binding sites

1. best match (score: 0.87)
with TRANSFAC motif: AS$NKX61_11 - artificial sequence.
bound by: Nkx6-1
             GATCCATTAAAAGCAATCAAAACAGAGATC
                      +++||++||||+++
                      AAAAAAATACTAAC
                       C GC CCCACCCA
                             A GA
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00222 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00625 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00708 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01450 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01535 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_02046 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00331 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00499 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01615 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00168 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01244 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
CSN5 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC1V2_0_00734 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC1V2_0_01078 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC1V2_0_01186 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_00390 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_00764 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_00939 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_01236 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_02444 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_03281 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_03310 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_00030 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_00917 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_00995 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01545 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01738 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01783 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
abpD dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
alfA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
canA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
colC dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
cstf3 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
dstC dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
frmA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0216387 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0219997 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231515 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231673 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0232093 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0232191 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233078 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233565 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233920 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0237900 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
gpaH dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
numA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
nxnA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
pkgB dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
psmC5 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
psmD2 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
rapA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
rcdK dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
rps6 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
rsc22 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
snpC dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
srfA dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
thoc2 dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
ubqC dictyBase Home >> Chromosome 4:564524..569109 >> Gene: DDB_G0283357 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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