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Detailed motif information

General information
Motif ID: mDDB0219248db002
Number of genes with the motif: 135
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456
A 0% 0%100% 0% 57% 14% 0%
C 14% 86% 0%100% 29% 86% 86%
G 0% 0% 0% 0% 0% 0% 14%
T 86% 14% 0% 0% 14% 0% 0%
consensusTCACMCC

Matching with known binding sites

1. best match (score: 2.50)
with TRANSFAC motif: DROME$SO_05
bound by: toy
      GATTCACCCCTCACCGATTCCG
         ++++|++
         TCACACC
             C
2. best match (score: 2.50)
with TRANSFAC motif: RAT$PTHR1_01 - PTHR1 (parathyroid hormone-related peptide)
bound by: RXR-alpha, VDR
      GTACAGCTAGGACTTCTCACCCCTCTCCACCCTGAAGCCTTGCTGCT
                      ++++|++
                      TCACACC
                          C
3. best match (score: 2.50)
with TRANSFAC motif: AS$ZAP1_34 - artificial sequence.
bound by: ZAP1
      ATCGTTGACCGAGCCTCACCCCCCGGATCC
                     ++++|++
                     TCACACC
                         C
4. best match (score: 2.50)
with TRANSFAC motif: AS$TGA1_36 - artificial sequence.
bound by: TGA1
      TATCTTACATCACCCCTTAC
               ++++|++
               TCACACC
                   C
5. best match (score: 2.50)
with TRANSFAC motif: CHICK$H5_11 - H5 (histone 5)
bound by: GATA-1
      GCCGATATCACCCCGTCGCATGTGGCACGG
             ++++|++
             TCACACC
                 C
6. best match (score: 2.50)
with TRANSFAC motif: RAT$FAS_01 - FAS (fatty acid synthase)
bound by: SREBP-1
      ATCACCCCAC
       ++++|++
       TCACACC
           C
7. best match (score: 2.50)
with TRANSFAC motif: AS$RAR_13 - artificial sequence.
bound by: RAR-alpha1, RXR-alpha
      GAGTCACCCCTTATTGACCTTA
         ++++|++
         TCACACC
             C
8. best match (score: 2.50)
with TRANSFAC motif: Y$DDR2_02 - DDR2 (DNA damage responsive)

      TGTCTTTTCTCACCCCTTATGGGGAC
               ++++|++
               TCACACC
                   C
9. best match (score: 2.50)
with TRANSFAC motif: MTTF1$CONS - consensus.
bound by: mtTFA
      TTAACAGTCACCCCCAAC
             ++++|++
             TCACACC
                 C
10. best match (score: 2.50)
with TRANSFAC motif: AD$MLP_20 - MLP (major late promoter)
bound by: R1
      TGCCCGCTTTTGAGAGGGAGTACTCACCCCA
                             ++++|++
                             TCACACC
                                 C
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
AY007802 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00255 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00544 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00557 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00568 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_00908 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_01069 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_01583 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_01954 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC4V2_0_02099 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_00556 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_00689 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_00691 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_00724 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01019 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01109 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01388 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01445 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01533 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01735 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01793 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01799 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BC5V2_0_01938 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BEC6V2_0_00143 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BEC6V2_0_00786 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BEC6V2_0_01023 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BEC6V2_0_01157 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
BEC6V2_0_01315 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
CYP517A1 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
DD7-1 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00282 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00296 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00314 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00371 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00372 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00406 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00431 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_00503 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_01053 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_01250 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_01302 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_01835 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC1V2_0_01848 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00408 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00515 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00595 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00798 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00843 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_00924 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_01142 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_01566 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_01679 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_01810 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02072 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02175 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02325 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02401 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02514 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_02701 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC2V2_0_03346 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_00799 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_00813 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_01381 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_01512 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_01560 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_01653 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_01783 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
JC3V2_0_02023 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
RPLP0 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
TAF13 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
acad8 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
alaS dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
cad2 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
carA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
cigA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
cofB dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
csbA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
csbB dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
csbC dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
cshA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
dcd2B dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
dhkL dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
dng1 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
dscE dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
eIF6 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
galK dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
gbfA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
gefC dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0216320 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0216403 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0220714 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0229296 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0229938 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0230005 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0230038 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0230059 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0230174 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0231519 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0231607 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0231644 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0231658 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0231722 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0232156 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0232404 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0233080 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0233289 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0233723 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0233742 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0235188 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0235280 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0237590 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0237646 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0237834 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0237865 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
geneDDB0238126 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
gxcJ dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
hspC dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
lvsA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
mecr dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
mlkA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
ncsA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
ndrJ dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
pcmA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
ppiA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
psaA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
racE dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
slob1 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
snpC dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
snwA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
sonA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
sppA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
vps41 dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
wasA dictyBase Home >> Chromosome 2:69409..71417 >> Gene: udkD >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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