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Detailed motif information

General information
Motif ID: mDDB0219777db009
Number of genes with the motif: 65
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910
A 40% 20% 40% 40% 20% 80% 20% 20% 40% 40% 20%
C 60% 80% 60% 40% 80% 20% 80% 40% 20% 60% 80%
G 0% 0% 0% 20% 0% 0% 0% 0% 20% 0% 0%
T 0% 0% 0% 0% 0% 0% 0% 40% 20% 0% 0%
consensusMCMMCACYAMC

Matching with known binding sites

1. best match (score: 2.41)
with TRANSFAC motif: AS$SP1_16 - artificial sequence.
bound by: Sp1
          GCCCCGCCCCGCCCCGCCCCGCCCCGAT
            +++|+|+||++
            CCCCCACTACC
            AAAAACACTAA
               G   AG
2. best match (score: 1.42)
with TRANSFAC motif: RAT$CYTOP_09 - CYP1A1 (cytochrome P450, 1a1)
bound by: XF1, XF2
          GCTCTTCTCACGCAACTCCGG
                  +|+|++|||++
                  CCCCCACTACC
                  AAAAACACTAA
                     G   AG
3. best match (score: 1.18)
with TRANSFAC motif: AS$MEIS1_08 - artificial sequence.
bound by: Meis-1a, Meis-1b
          TGTCACGCAATGACAG
             +|+|++||||+
             CCCCCACTACC
             AAAAACACTAA
                G   AG
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00055 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_01615 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_01746 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_01781 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_01900 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC4V2_0_02099 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BC5V2_0_00057 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BEC6V2_0_00309 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BEC6V2_0_00817 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC1V2_0_00636 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC1V2_0_00691 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC1V2_0_01744 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_00340 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_00387 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_00881 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_02292 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_02398 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_02444 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC2V2_0_02912 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC3V2_0_00135 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC3V2_0_01665 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
aarA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
abcF2 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
abnB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
cbpF dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
cbpG dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
cofC dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
culD dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
dmtA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
dstC dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
ecmB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0216320 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0231588 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0231746 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0232156 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0233396 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0233869 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
geneDDB0234232 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
gxcII dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
gxcQ dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
ino80 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
lkhA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
pitC dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
pks32 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
pkyA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
psmC5 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
rhgB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
rps20 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
rsc22 dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
sonA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
stlB dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
sybA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
tagA dictyBase Home >> Chromosome 4:141214..141914 >> Gene: DDB_G0283003 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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